This function is a wrapper for the TasselGenotypePhenotype class. It is used for storing genotype information into a class object.

readGenotypeTableFromPath(path, keepDepth = FALSE, sortPositions = FALSE)

Arguments

path

A genotype data path (e.g. *.VCF, *.hmp, etc.).

keepDepth

Should depth be kept? Defaults to FALSE.

sortPositions

Should positions be sorted? Defaults to FALSE.

Value

Returns an object of TasselGenotypePhenotype class.