AssemblyServerDir RefDir RefFasta AssemblyDir AssemblyFasta AssemblyDBName Chromosome irods:/BL/Assemblies/B104 /tempFileDir/referenceFastas/ B73chr1.fa /tempFileDir/assemblyFastas/ B104chr1.fa B104_Assembly 1 irods:/BL/Assemblies/B104 /tempFileDir/referenceFastas/ B73chr2.fa /tempFileDir/assemblyFastas/ B104chr2.fa B104_Assembly 2 irods:/BL/Assemblies/B104 /tempFileDir/referenceFastas/ B73chr3.fa /tempFileDir/assemblyFastas/ B104chr3.fa B104_Assembly 3 irods:/BL/Assemblies/B97 /tempFileDir/referenceFastas/ B73chr1.fa /tempFileDir/assemblyFastas/ B97chr1.fa B97_Assembly 1 irods:/BL/Assemblies/B97 /tempFileDir/referenceFastas/ B73chr2.fa /tempFileDir/assemblyFastas/ B97chr2.fa B97_Assembly 2 irods:/BL/Assemblies/B97 /tempFileDir/referenceFastas/ B73chr3.fa /tempFileDir/assemblyFastas/ B97chr3.fa B97_Assembly 3